Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zc3h3Q8CHP0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Zc3h3Q8CHP0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zc3h3Q8CHP0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zc3h3Q8CHP0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Zc3h3Q8CHP0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Zc3h3Q8CHP0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zc3h3Q8CHP0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44357-201ENSMUST00000195897 142 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm19658-201ENSMUST00000196231 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44367-201ENSMUST00000196836 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44350-201ENSMUST00000197197 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44390-201ENSMUST00000197533 144 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44313-201ENSMUST00000198018 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44486-201ENSMUST00000198508 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44454-201ENSMUST00000198541 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44314-201ENSMUST00000199263 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44394-201ENSMUST00000199558 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44484-201ENSMUST00000199873 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44466-201ENSMUST00000200264 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm44359-201ENSMUST00000200671 138 ntBASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Zc3h3Q8CHP0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms