Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Gm29791-202ENSMUST00000207888 369 ntBASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm28Q8CGC6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Gm45058-201ENSMUST00000205810 766 ntBASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.46■□□□□ 0.87
Rbm28Q8CGC6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Gm6659-201ENSMUST00000174752 547 ntBASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm28Q8CGC6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rbm28Q8CGC6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rbm28Q8CGC6 Idnk-204ENSMUST00000226010 1898 ntBASIC20.44■□□□□ 0.86
Rbm28Q8CGC6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rbm28Q8CGC6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rbm28Q8CGC6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rbm28Q8CGC6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rbm28Q8CGC6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rbm28Q8CGC6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rbm28Q8CGC6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Gm2274-201ENSMUST00000184539 609 ntBASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm28Q8CGC6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Gm24841-201ENSMUST00000158676 357 ntBASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm28Q8CGC6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms