Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup88Q8CEC0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.43■□□□□ 0.86
Nup88Q8CEC0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup88Q8CEC0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Mtag2-201ENSMUST00000058665 714 ntBASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nup88Q8CEC0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Gm11643-201ENSMUST00000119578 864 ntBASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Gm10138-203ENSMUST00000206952 366 ntBASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nup88Q8CEC0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup88Q8CEC0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup88Q8CEC0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Nup88Q8CEC0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup88Q8CEC0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup88Q8CEC0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Gm38285-201ENSMUST00000192928 922 ntBASIC20.38■□□□□ 0.85
Nup88Q8CEC0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup88Q8CEC0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup88Q8CEC0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms