Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrif1Q8CDD9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lrif1Q8CDD9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrif1Q8CDD9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Gm27011-201ENSMUST00000182352 972 ntBASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Lrif1Q8CDD9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrif1Q8CDD9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms