Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Alx1Q8C8B0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.24■□□□□ 0.83
Alx1Q8C8B0 Gm7370-201ENSMUST00000219471 767 ntBASIC20.24■□□□□ 0.83
Alx1Q8C8B0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx1Q8C8B0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx1Q8C8B0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Alx1Q8C8B0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx1Q8C8B0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx1Q8C8B0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Mir7071-201ENSMUST00000184847 69 ntBASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Alx1Q8C8B0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Gm16061-201ENSMUST00000122167 857 ntBASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Gm45058-201ENSMUST00000205810 766 ntBASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx1Q8C8B0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.2■□□□□ 0.82
Alx1Q8C8B0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx1Q8C8B0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Gm10231-201ENSMUST00000181584 441 ntBASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Gm10175-202ENSMUST00000208752 441 ntBASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Gm18959-201ENSMUST00000208954 655 ntBASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx1Q8C8B0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Gm13474-201ENSMUST00000122466 815 ntBASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Gm27000-201ENSMUST00000182943 842 ntBASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx1Q8C8B0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms