Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.24■□□□□ 0.51
Uba3Q8C878 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Uba3Q8C878 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Gm5417-201ENSMUST00000079706 384 ntBASIC18.24■□□□□ 0.51
Uba3Q8C878 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.24■□□□□ 0.51
Uba3Q8C878 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.24■□□□□ 0.51
Uba3Q8C878 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Uba3Q8C878 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Uba3Q8C878 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Uba3Q8C878 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Uba3Q8C878 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Gm37055-201ENSMUST00000191866 133 ntBASIC18.23■□□□□ 0.51
Uba3Q8C878 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Uba3Q8C878 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Uba3Q8C878 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Uba3Q8C878 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Uba3Q8C878 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.22■□□□□ 0.51
Uba3Q8C878 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Uba3Q8C878 Gm38027-201ENSMUST00000192315 235 ntBASIC18.22■□□□□ 0.51
Uba3Q8C878 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Gm21814-202ENSMUST00000203277 873 ntBASIC18.22■□□□□ 0.51
Uba3Q8C878 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.22■□□□□ 0.51
Uba3Q8C878 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Uba3Q8C878 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Uba3Q8C878 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Uba3Q8C878 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.21■□□□□ 0.51
Uba3Q8C878 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Mir6982-201ENSMUST00000184354 68 ntBASIC18.21■□□□□ 0.51
Uba3Q8C878 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.21■□□□□ 0.51
Uba3Q8C878 Gm3375-201ENSMUST00000203929 796 ntBASIC18.21■□□□□ 0.51
Uba3Q8C878 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Uba3Q8C878 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uba3Q8C878 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Uba3Q8C878 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Uba3Q8C878 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.2■□□□□ 0.5
Uba3Q8C878 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.2■□□□□ 0.5
Uba3Q8C878 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.2■□□□□ 0.5
Uba3Q8C878 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.2■□□□□ 0.5
Uba3Q8C878 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uba3Q8C878 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Uba3Q8C878 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.19■□□□□ 0.5
Uba3Q8C878 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms