Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.27■□□□□ 0.84
Usp44Q8C2S0 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.27■□□□□ 0.84
Usp44Q8C2S0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Gm7791-201ENSMUST00000219066 539 ntBASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Usp44Q8C2S0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Usp44Q8C2S0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Usp44Q8C2S0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.27■□□□□ 0.83
Usp44Q8C2S0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Usp44Q8C2S0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Usp44Q8C2S0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Gm5417-201ENSMUST00000079706 384 ntBASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp44Q8C2S0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.25■□□□□ 0.83
Usp44Q8C2S0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp44Q8C2S0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp44Q8C2S0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Usp44Q8C2S0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms