Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ptcd1Q8C2E4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptcd1Q8C2E4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Gm27742-201ENSMUST00000184667 60 ntBASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd1Q8C2E4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd1Q8C2E4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptcd1Q8C2E4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptcd1Q8C2E4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptcd1Q8C2E4 Gm6623-201ENSMUST00000173570 544 ntBASIC21.27■■□□□ 1
Ptcd1Q8C2E4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ptcd1Q8C2E4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptcd1Q8C2E4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ptcd1Q8C2E4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Ptcd1Q8C2E4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ptcd1Q8C2E4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ptcd1Q8C2E4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Gm26039-201ENSMUST00000158152 144 ntBASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.26■□□□□ 0.99
Ptcd1Q8C2E4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.25■□□□□ 0.99
Ptcd1Q8C2E4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptcd1Q8C2E4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Ptcd1Q8C2E4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptcd1Q8C2E4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptcd1Q8C2E4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptcd1Q8C2E4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms