Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Mir1668-201ENSMUST00000184114 107 ntBASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Gm7213-201ENSMUST00000215977 950 ntBASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Gm21559-201ENSMUST00000220638 855 ntBASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Gm8587-201ENSMUST00000076538 843 ntBASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Rarb-207ENSMUST00000225921 2756 ntBASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3rf2Q8BZT2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Gm10819-201ENSMUST00000099988 561 ntBASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3rf2Q8BZT2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Gm33142-201ENSMUST00000193913 867 ntBASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3rf2Q8BZT2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Gm25016-201ENSMUST00000158399 131 ntBASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf2Q8BZT2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3rf2Q8BZT2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3rf2Q8BZT2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sh3rf2Q8BZT2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms