Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp40Q8BWR4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp40Q8BWR4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp40Q8BWR4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Usp40Q8BWR4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp40Q8BWR4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp40Q8BWR4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Usp40Q8BWR4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp40Q8BWR4 Gm11860-201ENSMUST00000122346 1010 ntBASIC23.77■■□□□ 1.4
Usp40Q8BWR4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp40Q8BWR4 Gm37722-201ENSMUST00000193757 208 ntBASIC23.77■■□□□ 1.4
Usp40Q8BWR4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp40Q8BWR4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Usp40Q8BWR4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp40Q8BWR4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Usp40Q8BWR4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp40Q8BWR4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp40Q8BWR4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Gm11950-201ENSMUST00000121615 838 ntBASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp40Q8BWR4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Usp40Q8BWR4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp40Q8BWR4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp40Q8BWR4 Mir770-201ENSMUST00000103252 94 ntBASIC23.72■■□□□ 1.39
Usp40Q8BWR4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp40Q8BWR4 Gm27000-201ENSMUST00000182943 842 ntBASIC23.72■■□□□ 1.39
Usp40Q8BWR4 Gm27741-201ENSMUST00000185060 237 ntBASIC23.72■■□□□ 1.39
Usp40Q8BWR4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp40Q8BWR4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp40Q8BWR4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp40Q8BWR4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp40Q8BWR4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp40Q8BWR4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp40Q8BWR4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp40Q8BWR4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC23.71■■□□□ 1.39
Usp40Q8BWR4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp40Q8BWR4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp40Q8BWR4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp40Q8BWR4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Usp40Q8BWR4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Usp40Q8BWR4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp40Q8BWR4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp40Q8BWR4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp40Q8BWR4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp40Q8BWR4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Usp40Q8BWR4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp40Q8BWR4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms