Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Usp43Q8BUM9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.52■□□□□ 0.39
Usp43Q8BUM9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp43Q8BUM9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp43Q8BUM9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp43Q8BUM9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp43Q8BUM9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp43Q8BUM9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp43Q8BUM9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.48■□□□□ 0.39
Usp43Q8BUM9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Gm10812-201ENSMUST00000099864 546 ntBASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms