Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Gm17661-201ENSMUST00000170317 270 ntBASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Gm9731-201ENSMUST00000209480 747 ntBASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Il3ra-202ENSMUST00000223589 738 ntBASIC16.69■□□□□ 0.26
Trim23Q8BGX0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim23Q8BGX0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Gm6433-201ENSMUST00000118634 875 ntBASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim23Q8BGX0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim23Q8BGX0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Gm7791-201ENSMUST00000219066 539 ntBASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim23Q8BGX0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms