Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trnp1Q80ZI1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trnp1Q80ZI1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trnp1Q80ZI1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trnp1Q80ZI1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnp1Q80ZI1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnp1Q80ZI1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Rps4l-201ENSMUST00000071745 943 ntBASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trnp1Q80ZI1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trnp1Q80ZI1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trnp1Q80ZI1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trnp1Q80ZI1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.52■□□□□ 0.71
Trnp1Q80ZI1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.52■□□□□ 0.71
Trnp1Q80ZI1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Gm2651-201ENSMUST00000203560 838 ntBASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Idnk-204ENSMUST00000226010 1898 ntBASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnp1Q80ZI1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Gm13186-201ENSMUST00000118031 316 ntBASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnp1Q80ZI1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms