Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Mir770-201ENSMUST00000103252 94 ntBASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Mir8112-201ENSMUST00000184382 131 ntBASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Gm27742-201ENSMUST00000184667 60 ntBASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Gm6623-201ENSMUST00000173570 544 ntBASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Mir3081-201ENSMUST00000175305 84 ntBASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.09■□□□□ 0.65
Usp6nlQ80XC3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Fst-202ENSMUST00000223640 2612 ntBASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp6nlQ80XC3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp6nlQ80XC3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp6nlQ80XC3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp6nlQ80XC3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp6nlQ80XC3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp6nlQ80XC3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp6nlQ80XC3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Usp6nlQ80XC3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Gm7461-201ENSMUST00000058918 827 ntBASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp6nlQ80XC3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp6nlQ80XC3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp6nlQ80XC3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Usp6nlQ80XC3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp6nlQ80XC3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp6nlQ80XC3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp6nlQ80XC3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Usp6nlQ80XC3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 150.7 ms