Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc116Q80X53 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.93■□□□□ 0.3
Ccdc116Q80X53 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc116Q80X53 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Gm18666-201ENSMUST00000190039 958 ntBASIC16.92■□□□□ 0.3
Ccdc116Q80X53 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc116Q80X53 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Gm5643-201ENSMUST00000117081 966 ntBASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Gm10698-201ENSMUST00000182663 604 ntBASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Gm43183-201ENSMUST00000200632 547 ntBASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc116Q80X53 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.9■□□□□ 0.3
Ccdc116Q80X53 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc116Q80X53 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc116Q80X53 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc116Q80X53 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc116Q80X53 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Gm12382-201ENSMUST00000122005 922 ntBASIC16.89■□□□□ 0.29
Ccdc116Q80X53 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Gm10653-202ENSMUST00000139570 835 ntBASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Gm10517-202ENSMUST00000192970 758 ntBASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc116Q80X53 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms