Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tspan18Q80WR1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tspan18Q80WR1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tspan18Q80WR1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Gm22697-201ENSMUST00000175194 63 ntBASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Tspan18Q80WR1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tspan18Q80WR1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Gm7213-201ENSMUST00000215977 950 ntBASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tspan18Q80WR1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tspan18Q80WR1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tspan18Q80WR1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tspan18Q80WR1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tspan18Q80WR1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tspan18Q80WR1 Gm18958-201ENSMUST00000174258 762 ntBASIC18.36■□□□□ 0.53
Tspan18Q80WR1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tspan18Q80WR1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.36■□□□□ 0.53
Tspan18Q80WR1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tspan18Q80WR1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Actl10-202ENSMUST00000226583 1501 ntBASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Gm27000-201ENSMUST00000182943 842 ntBASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Gm27389-201ENSMUST00000183622 195 ntBASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tspan18Q80WR1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Gm21559-201ENSMUST00000220638 855 ntBASIC18.34■□□□□ 0.53
Tspan18Q80WR1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Gm8587-201ENSMUST00000076538 843 ntBASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms