Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.94■□□□□ 0.62
Ush1gQ80T11 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.94■□□□□ 0.62
Ush1gQ80T11 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Gm7284-201ENSMUST00000131667 944 ntBASIC18.94■□□□□ 0.62
Ush1gQ80T11 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.94■□□□□ 0.62
Ush1gQ80T11 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ush1gQ80T11 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ush1gQ80T11 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ush1gQ80T11 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Gm27389-201ENSMUST00000183622 195 ntBASIC18.92■□□□□ 0.62
Ush1gQ80T11 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ush1gQ80T11 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.91■□□□□ 0.62
Ush1gQ80T11 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Gm17661-201ENSMUST00000170317 270 ntBASIC18.91■□□□□ 0.62
Ush1gQ80T11 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ush1gQ80T11 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ush1gQ80T11 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ush1gQ80T11 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ush1gQ80T11 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ush1gQ80T11 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.89■□□□□ 0.61
Ush1gQ80T11 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms