Protein–RNA interactions for Protein: Q7TN37

Trpm4, Transient receptor potential cation channel subfamily M member 4, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm4Q7TN37 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Gm13158-201ENSMUST00000122007 736 ntBASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpm4Q7TN37 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpm4Q7TN37 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Gm43799-201ENSMUST00000201845 579 ntBASIC17.67■□□□□ 0.42
Trpm4Q7TN37 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trpm4Q7TN37 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpm4Q7TN37 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Gm6433-201ENSMUST00000118634 875 ntBASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.65■□□□□ 0.42
Trpm4Q7TN37 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trpm4Q7TN37 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trpm4Q7TN37 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trpm4Q7TN37 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms