Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Sned1Q70E20 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.96■□□□□ 0.95
Sned1Q70E20 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 Golph3-205ENSMUST00000228671 2842 ntBASIC20.96■□□□□ 0.95
Sned1Q70E20 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sned1Q70E20 Gm23935-201ENSMUST00000102303 57 ntBASIC20.95■□□□□ 0.95
Sned1Q70E20 Gm24270-201ENSMUST00000102326 57 ntBASIC20.95■□□□□ 0.95
Sned1Q70E20 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Sned1Q70E20 Gm15165-201ENSMUST00000118140 502 ntBASIC20.95■□□□□ 0.95
Sned1Q70E20 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Sned1Q70E20 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.95
Sned1Q70E20 Gm24245-201ENSMUST00000157318 57 ntBASIC20.95■□□□□ 0.95
Sned1Q70E20 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Sned1Q70E20 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
Sned1Q70E20 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.95
Sned1Q70E20 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Sned1Q70E20 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Sned1Q70E20 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sned1Q70E20 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sned1Q70E20 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sned1Q70E20 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sned1Q70E20 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sned1Q70E20 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sned1Q70E20 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sned1Q70E20 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Sned1Q70E20 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Sned1Q70E20 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Sned1Q70E20 Gm44450-201ENSMUST00000199528 114 ntBASIC20.95■□□□□ 0.94
Sned1Q70E20 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sned1Q70E20 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.95■□□□□ 0.94
Sned1Q70E20 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sned1Q70E20 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sned1Q70E20 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Sned1Q70E20 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sned1Q70E20 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sned1Q70E20 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sned1Q70E20 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sned1Q70E20 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sned1Q70E20 Gm7063-201ENSMUST00000186840 981 ntBASIC20.94■□□□□ 0.94
Sned1Q70E20 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.94■□□□□ 0.94
Sned1Q70E20 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.94■□□□□ 0.94
Sned1Q70E20 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.94■□□□□ 0.94
Sned1Q70E20 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sned1Q70E20 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sned1Q70E20 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sned1Q70E20 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Sned1Q70E20 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.93■□□□□ 0.94
Sned1Q70E20 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sned1Q70E20 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Sned1Q70E20 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.93■□□□□ 0.94
Sned1Q70E20 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sned1Q70E20 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sned1Q70E20 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.92■□□□□ 0.94
Sned1Q70E20 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.92■□□□□ 0.94
Sned1Q70E20 Gm15467-201ENSMUST00000120582 445 ntBASIC20.92■□□□□ 0.94
Sned1Q70E20 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.92■□□□□ 0.94
Sned1Q70E20 Psmb5-202ENSMUST00000227257 622 ntBASIC20.92■□□□□ 0.94
Sned1Q70E20 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sned1Q70E20 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Sned1Q70E20 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Sned1Q70E20 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Sned1Q70E20 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms