Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx55Q6ZPL9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ddx55Q6ZPL9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx55Q6ZPL9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx55Q6ZPL9 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.72■□□□□ 0.75
Ddx55Q6ZPL9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx55Q6ZPL9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 AW822252-206ENSMUST00000208904 237 ntBASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx55Q6ZPL9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Gm43347-201ENSMUST00000200226 580 ntBASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx55Q6ZPL9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx55Q6ZPL9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Gm11336-201ENSMUST00000118168 334 ntBASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx55Q6ZPL9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx55Q6ZPL9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Gm27000-201ENSMUST00000182943 842 ntBASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms