Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Gm11927-201ENSMUST00000118472 759 ntBASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casc1Q6TDU8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casc1Q6TDU8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Gm22240-201ENSMUST00000175225 82 ntBASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Casc1Q6TDU8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Casc1Q6TDU8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casc1Q6TDU8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Casc1Q6TDU8 Zfp783-201ENSMUST00000095946 670 ntBASIC20.65■□□□□ 0.9
Casc1Q6TDU8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.65■□□□□ 0.9
Casc1Q6TDU8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casc1Q6TDU8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Casc1Q6TDU8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Casc1Q6TDU8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Casc1Q6TDU8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casc1Q6TDU8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Gm5643-201ENSMUST00000117081 966 ntBASIC20.63■□□□□ 0.89
Casc1Q6TDU8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Casc1Q6TDU8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc1Q6TDU8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms