Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Npc1l1Q6T3U4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.77■□□□□ 0.91
Npc1l1Q6T3U4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.76■□□□□ 0.91
Npc1l1Q6T3U4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Rarb-207ENSMUST00000225921 2756 ntBASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Gm13474-201ENSMUST00000122466 815 ntBASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.75■□□□□ 0.91
Npc1l1Q6T3U4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.74■□□□□ 0.91
Npc1l1Q6T3U4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Ank2-226ENSMUST00000189368 339 ntBASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.73■□□□□ 0.91
Npc1l1Q6T3U4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Npc1l1Q6T3U4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1l1Q6T3U4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Npc1l1Q6T3U4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1l1Q6T3U4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms