Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Gm18958-201ENSMUST00000174258 762 ntBASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx58Q6Q899 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx58Q6Q899 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.39■■□□□ 1.02
Ddx58Q6Q899 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Ddx58Q6Q899 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx58Q6Q899 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Gm25016-201ENSMUST00000158399 131 ntBASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Gm21362-201ENSMUST00000194272 928 ntBASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx58Q6Q899 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.38■■□□□ 1.01
Ddx58Q6Q899 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx58Q6Q899 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Actl10-202ENSMUST00000226583 1501 ntBASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Gm33142-201ENSMUST00000193913 867 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms