Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup98Q6PFD9 Gm13186-201ENSMUST00000118031 316 ntBASIC20.44■□□□□ 0.86
Nup98Q6PFD9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup98Q6PFD9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.44■□□□□ 0.86
Nup98Q6PFD9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup98Q6PFD9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nup98Q6PFD9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Gm44450-201ENSMUST00000199528 114 ntBASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup98Q6PFD9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Olfr129-201ENSMUST00000122318 993 ntBASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup98Q6PFD9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup98Q6PFD9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup98Q6PFD9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup98Q6PFD9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup98Q6PFD9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup98Q6PFD9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.4■□□□□ 0.86
Nup98Q6PFD9 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.4■□□□□ 0.86
Nup98Q6PFD9 Gm18115-201ENSMUST00000221209 621 ntBASIC20.4■□□□□ 0.86
Nup98Q6PFD9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.4■□□□□ 0.86
Nup98Q6PFD9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup98Q6PFD9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup98Q6PFD9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nup98Q6PFD9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.4■□□□□ 0.86
Nup98Q6PFD9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Nup98Q6PFD9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.4■□□□□ 0.86
Nup98Q6PFD9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Nup98Q6PFD9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup98Q6PFD9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.39■□□□□ 0.86
Nup98Q6PFD9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nup98Q6PFD9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup98Q6PFD9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup98Q6PFD9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup98Q6PFD9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.39■□□□□ 0.86
Nup98Q6PFD9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nup98Q6PFD9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup98Q6PFD9 Gm15794-201ENSMUST00000120182 631 ntBASIC20.39■□□□□ 0.85
Nup98Q6PFD9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup98Q6PFD9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms