Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Gm3375-201ENSMUST00000203929 796 ntBASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Odf3b-204ENSMUST00000227834 930 ntBASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl3Q6P1Y1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Gm24841-201ENSMUST00000158676 357 ntBASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl3Q6P1Y1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl3Q6P1Y1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl3Q6P1Y1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Gm38027-201ENSMUST00000192315 235 ntBASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl3Q6P1Y1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Gm30025-201ENSMUST00000218555 728 ntBASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtl3Q6P1Y1 Rarb-207ENSMUST00000225921 2756 ntBASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtl3Q6P1Y1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms