Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trim27Q62158 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trim27Q62158 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Gm17661-201ENSMUST00000170317 270 ntBASIC21.24■□□□□ 0.99
Trim27Q62158 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim27Q62158 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim27Q62158 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.24■□□□□ 0.99
Trim27Q62158 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Gm10812-201ENSMUST00000099864 546 ntBASIC21.24■□□□□ 0.99
Trim27Q62158 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Trim27Q62158 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim27Q62158 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim27Q62158 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim27Q62158 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Trim27Q62158 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim27Q62158 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim27Q62158 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim27Q62158 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trim27Q62158 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Trim27Q62158 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim27Q62158 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim27Q62158 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Trim27Q62158 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim27Q62158 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Trim27Q62158 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim27Q62158 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Trim27Q62158 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Trim27Q62158 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.22■□□□□ 0.99
Trim27Q62158 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim27Q62158 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim27Q62158 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim27Q62158 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim27Q62158 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim27Q62158 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.22■□□□□ 0.99
Trim27Q62158 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim27Q62158 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim27Q62158 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trim27Q62158 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim27Q62158 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Gm37025-201ENSMUST00000195159 829 ntBASIC21.21■□□□□ 0.99
Trim27Q62158 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim27Q62158 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trim27Q62158 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim27Q62158 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trim27Q62158 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim27Q62158 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim27Q62158 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.2■□□□□ 0.98
Trim27Q62158 Gm7638-201ENSMUST00000121348 967 ntBASIC21.2■□□□□ 0.98
Trim27Q62158 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.2■□□□□ 0.98
Trim27Q62158 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Trim27Q62158 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim27Q62158 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim27Q62158 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim27Q62158 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim27Q62158 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim27Q62158 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim27Q62158 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim27Q62158 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms