Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ecm1Q61508 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.21■□□□□ 0.67
Ecm1Q61508 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ecm1Q61508 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ecm1Q61508 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ecm1Q61508 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Ecm1Q61508 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ecm1Q61508 Gm15794-201ENSMUST00000120182 631 ntBASIC19.2■□□□□ 0.66
Ecm1Q61508 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ecm1Q61508 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.2■□□□□ 0.66
Ecm1Q61508 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ecm1Q61508 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.2■□□□□ 0.66
Ecm1Q61508 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.2■□□□□ 0.66
Ecm1Q61508 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ecm1Q61508 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ecm1Q61508 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.2■□□□□ 0.66
Ecm1Q61508 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ecm1Q61508 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ecm1Q61508 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ecm1Q61508 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ecm1Q61508 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ecm1Q61508 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ecm1Q61508 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ecm1Q61508 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.19■□□□□ 0.66
Ecm1Q61508 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ecm1Q61508 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.19■□□□□ 0.66
Ecm1Q61508 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.19■□□□□ 0.66
Ecm1Q61508 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ecm1Q61508 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ecm1Q61508 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.19■□□□□ 0.66
Ecm1Q61508 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ecm1Q61508 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ecm1Q61508 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.18■□□□□ 0.66
Ecm1Q61508 Gm34391-201ENSMUST00000203706 907 ntBASIC19.18■□□□□ 0.66
Ecm1Q61508 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.18■□□□□ 0.66
Ecm1Q61508 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ecm1Q61508 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ecm1Q61508 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ecm1Q61508 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ecm1Q61508 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ecm1Q61508 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ecm1Q61508 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ecm1Q61508 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ecm1Q61508 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Ecm1Q61508 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ecm1Q61508 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.17■□□□□ 0.66
Ecm1Q61508 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ecm1Q61508 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ecm1Q61508 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ecm1Q61508 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.16■□□□□ 0.66
Ecm1Q61508 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.16■□□□□ 0.66
Ecm1Q61508 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ecm1Q61508 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ecm1Q61508 Gm27000-201ENSMUST00000182943 842 ntBASIC19.16■□□□□ 0.66
Ecm1Q61508 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ecm1Q61508 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ecm1Q61508 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ecm1Q61508 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ecm1Q61508 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ecm1Q61508 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ecm1Q61508 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.15■□□□□ 0.66
Ecm1Q61508 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ecm1Q61508 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ecm1Q61508 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ecm1Q61508 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ecm1Q61508 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ecm1Q61508 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ecm1Q61508 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ecm1Q61508 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ecm1Q61508 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ecm1Q61508 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ecm1Q61508 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ecm1Q61508 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ecm1Q61508 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ecm1Q61508 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.14■□□□□ 0.65
Ecm1Q61508 Gm44771-201ENSMUST00000206975 626 ntBASIC19.14■□□□□ 0.65
Ecm1Q61508 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.14■□□□□ 0.65
Ecm1Q61508 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ecm1Q61508 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ecm1Q61508 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ecm1Q61508 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.14■□□□□ 0.65
Ecm1Q61508 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ecm1Q61508 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ecm1Q61508 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ecm1Q61508 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ecm1Q61508 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ecm1Q61508 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.13■□□□□ 0.65
Ecm1Q61508 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms