Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a4Q60857 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a4Q60857 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.73■□□□□ 0.43
Slc6a4Q60857 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a4Q60857 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.72■□□□□ 0.43
Slc6a4Q60857 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc6a4Q60857 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.72■□□□□ 0.43
Slc6a4Q60857 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a4Q60857 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.71■□□□□ 0.43
Slc6a4Q60857 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a4Q60857 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a4Q60857 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a4Q60857 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a4Q60857 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc6a4Q60857 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc6a4Q60857 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a4Q60857 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.7■□□□□ 0.42
Slc6a4Q60857 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.7■□□□□ 0.42
Slc6a4Q60857 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a4Q60857 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a4Q60857 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Gm10013-201ENSMUST00000106074 672 ntBASIC17.69■□□□□ 0.42
Slc6a4Q60857 Gm13474-201ENSMUST00000122466 815 ntBASIC17.69■□□□□ 0.42
Slc6a4Q60857 Gm22697-201ENSMUST00000175194 63 ntBASIC17.69■□□□□ 0.42
Slc6a4Q60857 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a4Q60857 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a4Q60857 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a4Q60857 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.67■□□□□ 0.42
Slc6a4Q60857 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.67■□□□□ 0.42
Slc6a4Q60857 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms