Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm37856-201ENSMUST00000191634 999 ntBASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Trmt13-210ENSMUST00000198454 880 ntBASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav5d-4Q5R1F6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Gm6576-201ENSMUST00000169678 883 ntBASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5d-4Q5R1F6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Gm42545-201ENSMUST00000202755 922 ntBASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Gm18025-201ENSMUST00000221733 862 ntBASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav5d-4Q5R1F6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms