Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Gm18958-201ENSMUST00000174258 762 ntBASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Gm26039-201ENSMUST00000158152 144 ntBASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf43Q5NCP0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.59■□□□□ 0.41
Rnf43Q5NCP0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf43Q5NCP0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf43Q5NCP0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf43Q5NCP0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rnf43Q5NCP0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rnf43Q5NCP0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf43Q5NCP0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf43Q5NCP0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf43Q5NCP0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms