Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Scn2bQ56A07 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn2bQ56A07 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.15■□□□□ 0.34
Scn2bQ56A07 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Gm20049-201ENSMUST00000219950 730 ntBASIC17.15■□□□□ 0.34
Scn2bQ56A07 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.15■□□□□ 0.34
Scn2bQ56A07 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.15■□□□□ 0.34
Scn2bQ56A07 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.14■□□□□ 0.34
Scn2bQ56A07 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scn2bQ56A07 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Gm12896-201ENSMUST00000118430 226 ntBASIC17.14■□□□□ 0.33
Scn2bQ56A07 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.14■□□□□ 0.33
Scn2bQ56A07 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Mtag2-201ENSMUST00000058665 714 ntBASIC17.14■□□□□ 0.33
Scn2bQ56A07 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn2bQ56A07 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2bQ56A07 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.13■□□□□ 0.33
Scn2bQ56A07 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Gm11927-201ENSMUST00000118472 759 ntBASIC17.13■□□□□ 0.33
Scn2bQ56A07 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2bQ56A07 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scn2bQ56A07 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.12■□□□□ 0.33
Scn2bQ56A07 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Gm13401-201ENSMUST00000117074 291 ntBASIC17.12■□□□□ 0.33
Scn2bQ56A07 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2bQ56A07 Flg-201ENSMUST00000050758 1488 ntBASIC17.12■□□□□ 0.33
Scn2bQ56A07 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2bQ56A07 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms