Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Gm6345-202ENSMUST00000180900 204 ntBASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Gm27389-201ENSMUST00000183622 195 ntBASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf38aQ4FK66 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38aQ4FK66 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38aQ4FK66 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Gm21362-201ENSMUST00000194272 928 ntBASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38aQ4FK66 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.14■□□□□ 0.82
Prpf38aQ4FK66 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Prpf38aQ4FK66 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38aQ4FK66 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38aQ4FK66 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38aQ4FK66 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38aQ4FK66 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.14■□□□□ 0.81
Prpf38aQ4FK66 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.14■□□□□ 0.81
Prpf38aQ4FK66 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38aQ4FK66 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms