Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Gm26039-201ENSMUST00000158152 144 ntBASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Mir8112-201ENSMUST00000184382 131 ntBASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil3Q3UFQ8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Gm18958-201ENSMUST00000174258 762 ntBASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Gm10566-201ENSMUST00000086739 996 ntBASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil3Q3UFQ8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Carmil3Q3UFQ8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Carmil3Q3UFQ8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Carmil3Q3UFQ8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Carmil3Q3UFQ8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Carmil3Q3UFQ8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Carmil3Q3UFQ8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Carmil3Q3UFQ8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Carmil3Q3UFQ8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Carmil3Q3UFQ8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Carmil3Q3UFQ8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Carmil3Q3UFQ8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Carmil3Q3UFQ8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Carmil3Q3UFQ8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Carmil3Q3UFQ8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Actl10-202ENSMUST00000226583 1501 ntBASIC20.82■□□□□ 0.92
Carmil3Q3UFQ8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Gm27357-201ENSMUST00000183754 135 ntBASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Carmil3Q3UFQ8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Carmil3Q3UFQ8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Carmil3Q3UFQ8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.8■□□□□ 0.92
Carmil3Q3UFQ8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Carmil3Q3UFQ8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Carmil3Q3UFQ8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms