Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.55■□□□□ 0.08
Chd8Q09XV5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd8Q09XV5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.54■□□□□ 0.08
Chd8Q09XV5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Mir6420-201ENSMUST00000185032 102 ntBASIC15.54■□□□□ 0.08
Chd8Q09XV5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.54■□□□□ 0.08
Chd8Q09XV5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd8Q09XV5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Gm11336-201ENSMUST00000118168 334 ntBASIC15.53■□□□□ 0.08
Chd8Q09XV5 Gm27628-201ENSMUST00000184911 107 ntBASIC15.53■□□□□ 0.08
Chd8Q09XV5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Chd8Q09XV5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Chd8Q09XV5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd8Q09XV5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd8Q09XV5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Chd8Q09XV5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Chd8Q09XV5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chd8Q09XV5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Chd8Q09XV5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chd8Q09XV5 Mir8117-201ENSMUST00000184773 107 ntBASIC15.52■□□□□ 0.07
Chd8Q09XV5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.52■□□□□ 0.07
Chd8Q09XV5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.52■□□□□ 0.07
Chd8Q09XV5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd8Q09XV5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Chd8Q09XV5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.51■□□□□ 0.07
Chd8Q09XV5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.51■□□□□ 0.07
Chd8Q09XV5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd8Q09XV5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chd8Q09XV5 Gm11764-201ENSMUST00000120221 623 ntBASIC15.5■□□□□ 0.07
Chd8Q09XV5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd8Q09XV5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chd8Q09XV5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd8Q09XV5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd8Q09XV5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Chd8Q09XV5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd8Q09XV5 Gm12428-201ENSMUST00000119844 727 ntBASIC15.5■□□□□ 0.07
Chd8Q09XV5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd8Q09XV5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.5■□□□□ 0.07
Chd8Q09XV5 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.5■□□□□ 0.07
Chd8Q09XV5 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.5■□□□□ 0.07
Chd8Q09XV5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms