Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tff1Q08423 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tff1Q08423 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.39□□□□□ -0.11
Tff1Q08423 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tff1Q08423 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tff1Q08423 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.38□□□□□ -0.11
Tff1Q08423 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.38□□□□□ -0.11
Tff1Q08423 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tff1Q08423 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.38□□□□□ -0.11
Tff1Q08423 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tff1Q08423 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.38□□□□□ -0.11
Tff1Q08423 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tff1Q08423 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff1Q08423 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tff1Q08423 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tff1Q08423 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Tff1Q08423 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Tff1Q08423 Gm26524-201ENSMUST00000192339 390 ntBASIC14.37□□□□□ -0.11
Tff1Q08423 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.37□□□□□ -0.11
Tff1Q08423 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.37□□□□□ -0.11
Tff1Q08423 Rab3c-203ENSMUST00000224180 967 ntBASIC14.37□□□□□ -0.11
Tff1Q08423 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tff1Q08423 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tff1Q08423 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tff1Q08423 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff1Q08423 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Tff1Q08423 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.36□□□□□ -0.11
Tff1Q08423 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.36□□□□□ -0.11
Tff1Q08423 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.36□□□□□ -0.11
Tff1Q08423 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tff1Q08423 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tff1Q08423 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.36□□□□□ -0.11
Tff1Q08423 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tff1Q08423 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff1Q08423 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tff1Q08423 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff1Q08423 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.35□□□□□ -0.11
Tff1Q08423 Gm27275-201ENSMUST00000184318 272 ntBASIC14.35□□□□□ -0.11
Tff1Q08423 Gm8969-201ENSMUST00000199694 526 ntBASIC14.35□□□□□ -0.11
Tff1Q08423 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.35□□□□□ -0.11
Tff1Q08423 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms