Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf1Q07802 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Ebf1Q07802 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ebf1Q07802 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf1Q07802 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.5■□□□□ 0.39
Ebf1Q07802 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf1Q07802 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf1Q07802 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf1Q07802 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.5■□□□□ 0.39
Ebf1Q07802 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.5■□□□□ 0.39
Ebf1Q07802 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf1Q07802 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf1Q07802 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Ebf1Q07802 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ebf1Q07802 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.5■□□□□ 0.39
Ebf1Q07802 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf1Q07802 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.5■□□□□ 0.39
Ebf1Q07802 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf1Q07802 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ebf1Q07802 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf1Q07802 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf1Q07802 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf1Q07802 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.49■□□□□ 0.39
Ebf1Q07802 Gm17661-201ENSMUST00000170317 270 ntBASIC17.49■□□□□ 0.39
Ebf1Q07802 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.49■□□□□ 0.39
Ebf1Q07802 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf1Q07802 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.49■□□□□ 0.39
Ebf1Q07802 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf1Q07802 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ebf1Q07802 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf1Q07802 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ebf1Q07802 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.48■□□□□ 0.39
Ebf1Q07802 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.48■□□□□ 0.39
Ebf1Q07802 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.48■□□□□ 0.39
Ebf1Q07802 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Ebf1Q07802 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ebf1Q07802 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.48■□□□□ 0.39
Ebf1Q07802 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf1Q07802 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ebf1Q07802 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.47■□□□□ 0.39
Ebf1Q07802 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.47■□□□□ 0.39
Ebf1Q07802 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf1Q07802 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.46■□□□□ 0.39
Ebf1Q07802 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.46■□□□□ 0.39
Ebf1Q07802 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ebf1Q07802 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.46■□□□□ 0.39
Ebf1Q07802 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf1Q07802 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.46■□□□□ 0.39
Ebf1Q07802 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ebf1Q07802 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ebf1Q07802 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ebf1Q07802 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Ebf1Q07802 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.45■□□□□ 0.38
Ebf1Q07802 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf1Q07802 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.45■□□□□ 0.38
Ebf1Q07802 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms