Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox4Q06831 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Sox4Q06831 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.02■□□□□ 0.32
Sox4Q06831 Gm11539-201ENSMUST00000119837 557 ntBASIC17.02■□□□□ 0.32
Sox4Q06831 Gm13436-201ENSMUST00000120418 567 ntBASIC17.02■□□□□ 0.32
Sox4Q06831 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox4Q06831 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox4Q06831 Gm43799-201ENSMUST00000201845 579 ntBASIC17.02■□□□□ 0.32
Sox4Q06831 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.02■□□□□ 0.32
Sox4Q06831 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox4Q06831 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox4Q06831 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox4Q06831 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.02■□□□□ 0.31
Sox4Q06831 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sox4Q06831 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Sox4Q06831 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox4Q06831 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox4Q06831 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.01■□□□□ 0.31
Sox4Q06831 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sox4Q06831 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox4Q06831 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sox4Q06831 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox4Q06831 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sox4Q06831 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox4Q06831 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox4Q06831 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox4Q06831 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sox4Q06831 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox4Q06831 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox4Q06831 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sox4Q06831 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.01■□□□□ 0.31
Sox4Q06831 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.01■□□□□ 0.31
Sox4Q06831 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox4Q06831 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox4Q06831 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox4Q06831 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox4Q06831 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox4Q06831 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17■□□□□ 0.31
Sox4Q06831 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17■□□□□ 0.31
Sox4Q06831 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sox4Q06831 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sox4Q06831 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17■□□□□ 0.31
Sox4Q06831 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sox4Q06831 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sox4Q06831 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.99■□□□□ 0.31
Sox4Q06831 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Sox4Q06831 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sox4Q06831 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 Gm37025-201ENSMUST00000195159 829 ntBASIC16.99■□□□□ 0.31
Sox4Q06831 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sox4Q06831 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox4Q06831 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.99■□□□□ 0.31
Sox4Q06831 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox4Q06831 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox4Q06831 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.98■□□□□ 0.31
Sox4Q06831 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox4Q06831 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox4Q06831 Gm27463-201ENSMUST00000183569 57 ntBASIC16.98■□□□□ 0.31
Sox4Q06831 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.98■□□□□ 0.31
Sox4Q06831 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.98■□□□□ 0.31
Sox4Q06831 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox4Q06831 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox4Q06831 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox4Q06831 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox4Q06831 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sox4Q06831 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox4Q06831 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox4Q06831 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.97■□□□□ 0.31
Sox4Q06831 Gm13559-201ENSMUST00000120476 863 ntBASIC16.97■□□□□ 0.31
Sox4Q06831 Gm8969-201ENSMUST00000199694 526 ntBASIC16.97■□□□□ 0.31
Sox4Q06831 Gm7791-201ENSMUST00000219066 539 ntBASIC16.97■□□□□ 0.31
Sox4Q06831 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox4Q06831 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Sox4Q06831 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.97■□□□□ 0.31
Sox4Q06831 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Sox4Q06831 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox4Q06831 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox4Q06831 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms