Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm13436-201ENSMUST00000120418 567 ntBASIC16.35■□□□□ 0.21
Nkx3-2P97503 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.35■□□□□ 0.21
Nkx3-2P97503 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx3-2P97503 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Gm38027-201ENSMUST00000192315 235 ntBASIC16.34■□□□□ 0.21
Nkx3-2P97503 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx3-2P97503 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx3-2P97503 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx3-2P97503 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Nkx3-2P97503 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx3-2P97503 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx3-2P97503 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Gm27463-201ENSMUST00000183569 57 ntBASIC16.33■□□□□ 0.2
Nkx3-2P97503 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx3-2P97503 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.32■□□□□ 0.2
Nkx3-2P97503 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx3-2P97503 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx3-2P97503 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkx3-2P97503 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.3■□□□□ 0.2
Nkx3-2P97503 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkx3-2P97503 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.3■□□□□ 0.2
Nkx3-2P97503 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nkx3-2P97503 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx3-2P97503 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms