Protein–RNA interactions for Protein: P97358

Taf1b, TATA box-binding protein-associated factor RNA polymerase I subunit B, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1bP97358 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Taf1bP97358 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.26■□□□□ 0.67
Taf1bP97358 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Taf1bP97358 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Taf1bP97358 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.26■□□□□ 0.67
Taf1bP97358 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.26■□□□□ 0.67
Taf1bP97358 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.26■□□□□ 0.67
Taf1bP97358 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Taf1bP97358 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Taf1bP97358 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Taf1bP97358 Gm10819-201ENSMUST00000099988 561 ntBASIC19.26■□□□□ 0.67
Taf1bP97358 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Taf1bP97358 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Taf1bP97358 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Taf1bP97358 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Taf1bP97358 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Taf1bP97358 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.25■□□□□ 0.67
Taf1bP97358 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.25■□□□□ 0.67
Taf1bP97358 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Taf1bP97358 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Taf1bP97358 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Taf1bP97358 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.25■□□□□ 0.67
Taf1bP97358 Gm7213-201ENSMUST00000215977 950 ntBASIC19.25■□□□□ 0.67
Taf1bP97358 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Taf1bP97358 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Taf1bP97358 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Taf1bP97358 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.24■□□□□ 0.67
Taf1bP97358 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Taf1bP97358 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.24■□□□□ 0.67
Taf1bP97358 Gm7367-201ENSMUST00000057611 492 ntBASIC19.24■□□□□ 0.67
Taf1bP97358 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Taf1bP97358 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Taf1bP97358 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Taf1bP97358 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Taf1bP97358 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Taf1bP97358 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Taf1bP97358 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Taf1bP97358 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Taf1bP97358 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Taf1bP97358 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Taf1bP97358 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Taf1bP97358 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Taf1bP97358 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Taf1bP97358 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.23■□□□□ 0.67
Taf1bP97358 Gm33142-201ENSMUST00000193913 867 ntBASIC19.23■□□□□ 0.67
Taf1bP97358 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.23■□□□□ 0.67
Taf1bP97358 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Taf1bP97358 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Taf1bP97358 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Taf1bP97358 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Taf1bP97358 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf1bP97358 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Taf1bP97358 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf1bP97358 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Taf1bP97358 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf1bP97358 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf1bP97358 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf1bP97358 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf1bP97358 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf1bP97358 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Taf1bP97358 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf1bP97358 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Taf1bP97358 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.21■□□□□ 0.67
Taf1bP97358 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Taf1bP97358 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Taf1bP97358 Gm27389-201ENSMUST00000183622 195 ntBASIC19.21■□□□□ 0.67
Taf1bP97358 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Taf1bP97358 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.21■□□□□ 0.67
Taf1bP97358 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf1bP97358 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf1bP97358 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf1bP97358 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf1bP97358 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.21■□□□□ 0.67
Taf1bP97358 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.21■□□□□ 0.67
Taf1bP97358 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf1bP97358 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf1bP97358 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Taf1bP97358 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf1bP97358 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms