Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 Gm12085-201ENSMUST00000119263 940 ntBASIC18.82■□□□□ 0.6
Trim43cP86449 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 Mir5122-201ENSMUST00000175004 89 ntBASIC18.82■□□□□ 0.6
Trim43cP86449 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim43cP86449 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim43cP86449 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim43cP86449 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim43cP86449 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim43cP86449 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim43cP86449 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Trim43cP86449 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim43cP86449 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim43cP86449 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim43cP86449 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43cP86449 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim43cP86449 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43cP86449 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43cP86449 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim43cP86449 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim43cP86449 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim43cP86449 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim43cP86449 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim43cP86449 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.8■□□□□ 0.6
Trim43cP86449 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.8■□□□□ 0.6
Trim43cP86449 Gm3375-201ENSMUST00000203929 796 ntBASIC18.8■□□□□ 0.6
Trim43cP86449 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim43cP86449 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.8■□□□□ 0.6
Trim43cP86449 Odf3b-204ENSMUST00000227834 930 ntBASIC18.8■□□□□ 0.6
Trim43cP86449 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43cP86449 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim43cP86449 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trim43cP86449 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43cP86449 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43cP86449 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43cP86449 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43cP86449 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim43cP86449 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43cP86449 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim43cP86449 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Trim43cP86449 Gm17661-201ENSMUST00000170317 270 ntBASIC18.79■□□□□ 0.6
Trim43cP86449 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43cP86449 Gm10812-201ENSMUST00000099864 546 ntBASIC18.79■□□□□ 0.6
Trim43cP86449 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43cP86449 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim43cP86449 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Trim43cP86449 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43cP86449 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Trim43cP86449 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim43cP86449 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim43cP86449 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim43cP86449 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim43cP86449 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Trim43cP86449 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.78■□□□□ 0.6
Trim43cP86449 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.78■□□□□ 0.6
Trim43cP86449 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim43cP86449 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Trim43cP86449 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Trim43cP86449 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43cP86449 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms