Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SgcbP82349 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SgcbP82349 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SgcbP82349 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SgcbP82349 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SgcbP82349 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SgcbP82349 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SgcbP82349 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SgcbP82349 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SgcbP82349 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SgcbP82349 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SgcbP82349 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SgcbP82349 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SgcbP82349 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SgcbP82349 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.46■□□□□ 0.07
SgcbP82349 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.46■□□□□ 0.07
SgcbP82349 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.46■□□□□ 0.07
SgcbP82349 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SgcbP82349 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SgcbP82349 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SgcbP82349 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SgcbP82349 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SgcbP82349 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.45■□□□□ 0.06
SgcbP82349 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
SgcbP82349 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.45■□□□□ 0.06
SgcbP82349 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SgcbP82349 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.45■□□□□ 0.06
SgcbP82349 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SgcbP82349 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SgcbP82349 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.44■□□□□ 0.06
SgcbP82349 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.44■□□□□ 0.06
SgcbP82349 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.44■□□□□ 0.06
SgcbP82349 Odf3b-204ENSMUST00000227834 930 ntBASIC15.44■□□□□ 0.06
SgcbP82349 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SgcbP82349 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SgcbP82349 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SgcbP82349 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.43■□□□□ 0.06
SgcbP82349 Grk6-206ENSMUST00000224995 2971 ntBASIC15.43■□□□□ 0.06
SgcbP82349 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.43■□□□□ 0.06
SgcbP82349 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.43■□□□□ 0.06
SgcbP82349 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.43■□□□□ 0.06
SgcbP82349 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.43■□□□□ 0.06
SgcbP82349 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SgcbP82349 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SgcbP82349 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.42■□□□□ 0.06
SgcbP82349 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.42■□□□□ 0.06
SgcbP82349 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SgcbP82349 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SgcbP82349 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.42■□□□□ 0.06
SgcbP82349 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.42■□□□□ 0.06
SgcbP82349 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms