Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Rad50P70388 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Rad50P70388 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Gm12382-201ENSMUST00000122005 922 ntBASIC20.78■□□□□ 0.92
Rad50P70388 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Gm21814-202ENSMUST00000203277 873 ntBASIC20.78■□□□□ 0.92
Rad50P70388 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.78■□□□□ 0.92
Rad50P70388 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.78■□□□□ 0.92
Rad50P70388 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rad50P70388 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Gm6433-201ENSMUST00000118634 875 ntBASIC20.78■□□□□ 0.92
Rad50P70388 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.78■□□□□ 0.92
Rad50P70388 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.78■□□□□ 0.92
Rad50P70388 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.78■□□□□ 0.92
Rad50P70388 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.78■□□□□ 0.92
Rad50P70388 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rad50P70388 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Rad50P70388 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rad50P70388 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rad50P70388 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rad50P70388 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rad50P70388 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Rad50P70388 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.77■□□□□ 0.92
Rad50P70388 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rad50P70388 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rad50P70388 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rad50P70388 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rad50P70388 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rad50P70388 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Rad50P70388 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rad50P70388 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.77■□□□□ 0.91
Rad50P70388 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rad50P70388 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Rad50P70388 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rad50P70388 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rad50P70388 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rad50P70388 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Rad50P70388 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rad50P70388 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rad50P70388 Gm43799-201ENSMUST00000201845 579 ntBASIC20.76■□□□□ 0.91
Rad50P70388 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.76■□□□□ 0.91
Rad50P70388 Odf3b-204ENSMUST00000227834 930 ntBASIC20.76■□□□□ 0.91
Rad50P70388 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rad50P70388 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rad50P70388 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rad50P70388 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rad50P70388 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rad50P70388 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rad50P70388 Gm30025-201ENSMUST00000218555 728 ntBASIC20.75■□□□□ 0.91
Rad50P70388 Timm23-208ENSMUST00000226683 750 ntBASIC20.75■□□□□ 0.91
Rad50P70388 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rad50P70388 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rad50P70388 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rad50P70388 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rad50P70388 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rad50P70388 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rad50P70388 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rad50P70388 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rad50P70388 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.74■□□□□ 0.91
Rad50P70388 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rad50P70388 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rad50P70388 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rad50P70388 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms