Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Six5P70178 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Six5P70178 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Six5P70178 Rarb-207ENSMUST00000225921 2756 ntBASIC16.21■□□□□ 0.18
Six5P70178 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.21■□□□□ 0.18
Six5P70178 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Six5P70178 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Gm24841-201ENSMUST00000158676 357 ntBASIC16.2■□□□□ 0.18
Six5P70178 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.2■□□□□ 0.18
Six5P70178 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Six5P70178 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.2■□□□□ 0.18
Six5P70178 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.2■□□□□ 0.18
Six5P70178 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Six5P70178 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six5P70178 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Six5P70178 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Six5P70178 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.19■□□□□ 0.18
Six5P70178 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Six5P70178 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.19■□□□□ 0.18
Six5P70178 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.19■□□□□ 0.18
Six5P70178 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Six5P70178 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Six5P70178 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.18■□□□□ 0.18
Six5P70178 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six5P70178 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six5P70178 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Six5P70178 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six5P70178 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Six5P70178 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six5P70178 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Six5P70178 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six5P70178 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.18■□□□□ 0.18
Six5P70178 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Six5P70178 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.18■□□□□ 0.18
Six5P70178 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Six5P70178 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six5P70178 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Six5P70178 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six5P70178 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Six5P70178 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.17■□□□□ 0.18
Six5P70178 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.17■□□□□ 0.18
Six5P70178 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.17■□□□□ 0.18
Six5P70178 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Six5P70178 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Six5P70178 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six5P70178 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.16■□□□□ 0.18
Six5P70178 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Six5P70178 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Six5P70178 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six5P70178 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.15■□□□□ 0.18
Six5P70178 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six5P70178 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.15■□□□□ 0.18
Six5P70178 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.15■□□□□ 0.18
Six5P70178 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms