Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ThraP63058 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.52■□□□□ 0.4
ThraP63058 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ThraP63058 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ThraP63058 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ThraP63058 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ThraP63058 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ThraP63058 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ThraP63058 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ThraP63058 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ThraP63058 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.51■□□□□ 0.39
ThraP63058 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ThraP63058 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.51■□□□□ 0.39
ThraP63058 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.51■□□□□ 0.39
ThraP63058 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.51■□□□□ 0.39
ThraP63058 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Gm10138-203ENSMUST00000206952 366 ntBASIC17.51■□□□□ 0.39
ThraP63058 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ThraP63058 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ThraP63058 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.51■□□□□ 0.39
ThraP63058 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ThraP63058 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.5■□□□□ 0.39
ThraP63058 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.5■□□□□ 0.39
ThraP63058 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ThraP63058 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ThraP63058 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ThraP63058 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.5■□□□□ 0.39
ThraP63058 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ThraP63058 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ThraP63058 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ThraP63058 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.5■□□□□ 0.39
ThraP63058 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ThraP63058 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ThraP63058 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
ThraP63058 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.49■□□□□ 0.39
ThraP63058 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.49■□□□□ 0.39
ThraP63058 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.49■□□□□ 0.39
ThraP63058 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ThraP63058 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ThraP63058 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ThraP63058 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ThraP63058 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ThraP63058 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ThraP63058 Gm11643-201ENSMUST00000119578 864 ntBASIC17.48■□□□□ 0.39
ThraP63058 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ThraP63058 Gm38285-201ENSMUST00000192928 922 ntBASIC17.48■□□□□ 0.39
ThraP63058 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ThraP63058 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ThraP63058 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ThraP63058 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
ThraP63058 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ThraP63058 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ThraP63058 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ThraP63058 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
ThraP63058 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ThraP63058 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ThraP63058 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ThraP63058 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ThraP63058 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ThraP63058 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ThraP63058 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ThraP63058 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.47■□□□□ 0.39
ThraP63058 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ThraP63058 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms