Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.48□□□□□ -0.25
Pfn1P62962 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pfn1P62962 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.47□□□□□ -0.25
Pfn1P62962 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pfn1P62962 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfn1P62962 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pfn1P62962 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.46□□□□□ -0.25
Pfn1P62962 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.46□□□□□ -0.25
Pfn1P62962 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.46□□□□□ -0.25
Pfn1P62962 Gm40848-201ENSMUST00000221998 324 ntBASIC13.46□□□□□ -0.25
Pfn1P62962 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfn1P62962 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pfn1P62962 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pfn1P62962 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pfn1P62962 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.46□□□□□ -0.26
Pfn1P62962 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pfn1P62962 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pfn1P62962 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.45□□□□□ -0.26
Pfn1P62962 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.45□□□□□ -0.26
Pfn1P62962 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.45□□□□□ -0.26
Pfn1P62962 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
Pfn1P62962 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.45□□□□□ -0.26
Pfn1P62962 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.45□□□□□ -0.26
Pfn1P62962 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.45□□□□□ -0.26
Pfn1P62962 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Pfn1P62962 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pfn1P62962 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.45□□□□□ -0.26
Pfn1P62962 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pfn1P62962 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Pfn1P62962 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.44□□□□□ -0.26
Pfn1P62962 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pfn1P62962 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Pfn1P62962 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Pfn1P62962 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.44□□□□□ -0.26
Pfn1P62962 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfn1P62962 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.44□□□□□ -0.26
Pfn1P62962 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms