Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrch1P62046 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.38■□□□□ 0.85
Lrch1P62046 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrch1P62046 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrch1P62046 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrch1P62046 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrch1P62046 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrch1P62046 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.37■□□□□ 0.85
Lrch1P62046 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.37■□□□□ 0.85
Lrch1P62046 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.37■□□□□ 0.85
Lrch1P62046 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Lrch1P62046 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.37■□□□□ 0.85
Lrch1P62046 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrch1P62046 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.36■□□□□ 0.85
Lrch1P62046 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrch1P62046 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrch1P62046 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.36■□□□□ 0.85
Lrch1P62046 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Lrch1P62046 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Lrch1P62046 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
Lrch1P62046 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrch1P62046 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrch1P62046 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrch1P62046 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lrch1P62046 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrch1P62046 BC021767-201ENSMUST00000126387 1716 ntBASIC20.36■□□□□ 0.85
Lrch1P62046 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrch1P62046 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lrch1P62046 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lrch1P62046 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Lrch1P62046 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrch1P62046 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lrch1P62046 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Lrch1P62046 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrch1P62046 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.35■□□□□ 0.85
Lrch1P62046 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.35■□□□□ 0.85
Lrch1P62046 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.35■□□□□ 0.85
Lrch1P62046 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrch1P62046 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.35■□□□□ 0.85
Lrch1P62046 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lrch1P62046 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lrch1P62046 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Lrch1P62046 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.35■□□□□ 0.85
Lrch1P62046 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.35■□□□□ 0.85
Lrch1P62046 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrch1P62046 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lrch1P62046 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrch1P62046 Gm1401-201ENSMUST00000122048 772 ntBASIC20.34■□□□□ 0.85
Lrch1P62046 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.34■□□□□ 0.85
Lrch1P62046 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.34■□□□□ 0.85
Lrch1P62046 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lrch1P62046 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrch1P62046 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.34■□□□□ 0.85
Lrch1P62046 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Lrch1P62046 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrch1P62046 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lrch1P62046 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrch1P62046 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrch1P62046 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrch1P62046 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrch1P62046 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrch1P62046 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrch1P62046 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Lrch1P62046 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.33■□□□□ 0.85
Lrch1P62046 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.33■□□□□ 0.85
Lrch1P62046 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Lrch1P62046 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrch1P62046 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Lrch1P62046 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrch1P62046 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrch1P62046 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrch1P62046 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Lrch1P62046 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrch1P62046 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lrch1P62046 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrch1P62046 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrch1P62046 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.32■□□□□ 0.84
Lrch1P62046 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrch1P62046 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Lrch1P62046 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lrch1P62046 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrch1P62046 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.32■□□□□ 0.84
Lrch1P62046 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrch1P62046 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrch1P62046 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrch1P62046 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lrch1P62046 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Lrch1P62046 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrch1P62046 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms