Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.61■□□□□ 0.25
Cdkn2bP55271 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Gm18284-201ENSMUST00000172604 624 ntBASIC16.61■□□□□ 0.25
Cdkn2bP55271 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkn2bP55271 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.6■□□□□ 0.25
Cdkn2bP55271 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Gm42569-201ENSMUST00000200539 472 ntBASIC16.6■□□□□ 0.25
Cdkn2bP55271 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.6■□□□□ 0.25
Cdkn2bP55271 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkn2bP55271 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.59■□□□□ 0.25
Cdkn2bP55271 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cdkn2bP55271 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdkn2bP55271 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdkn2bP55271 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cdkn2bP55271 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkn2bP55271 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.57■□□□□ 0.24
Cdkn2bP55271 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Mir5133-201ENSMUST00000174955 77 ntBASIC16.57■□□□□ 0.24
Cdkn2bP55271 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Gm10138-203ENSMUST00000206952 366 ntBASIC16.57■□□□□ 0.24
Cdkn2bP55271 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkn2bP55271 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms