Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Msh6P54276 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.99■■□□□ 1.11
Msh6P54276 Gm26039-201ENSMUST00000158152 144 ntBASIC21.99■■□□□ 1.11
Msh6P54276 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Msh6P54276 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.99■■□□□ 1.11
Msh6P54276 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Msh6P54276 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.99■■□□□ 1.11
Msh6P54276 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Msh6P54276 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh6P54276 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Msh6P54276 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Msh6P54276 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Msh6P54276 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Msh6P54276 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Msh6P54276 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Msh6P54276 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Msh6P54276 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Msh6P54276 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Msh6P54276 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Msh6P54276 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Msh6P54276 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Msh6P54276 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.97■■□□□ 1.11
Msh6P54276 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Msh6P54276 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Msh6P54276 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Msh6P54276 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.97■■□□□ 1.11
Msh6P54276 Gm27742-201ENSMUST00000184667 60 ntBASIC21.97■■□□□ 1.11
Msh6P54276 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.97■■□□□ 1.11
Msh6P54276 Gm18115-201ENSMUST00000221209 621 ntBASIC21.97■■□□□ 1.11
Msh6P54276 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
Msh6P54276 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.96■■□□□ 1.11
Msh6P54276 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh6P54276 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh6P54276 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh6P54276 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.96■■□□□ 1.11
Msh6P54276 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Msh6P54276 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Msh6P54276 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh6P54276 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Msh6P54276 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Msh6P54276 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Msh6P54276 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Msh6P54276 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Msh6P54276 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Msh6P54276 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Msh6P54276 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Msh6P54276 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Msh6P54276 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.95■■□□□ 1.1
Msh6P54276 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Msh6P54276 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Msh6P54276 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msh6P54276 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.94■■□□□ 1.1
Msh6P54276 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msh6P54276 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msh6P54276 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.94■■□□□ 1.1
Msh6P54276 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh6P54276 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh6P54276 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Msh6P54276 Actl10-202ENSMUST00000226583 1501 ntBASIC21.93■■□□□ 1.1
Msh6P54276 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh6P54276 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Msh6P54276 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Msh6P54276 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.93■■□□□ 1.1
Msh6P54276 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh6P54276 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Msh6P54276 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh6P54276 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Msh6P54276 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.92■■□□□ 1.1
Msh6P54276 Gm37722-201ENSMUST00000193757 208 ntBASIC21.92■■□□□ 1.1
Msh6P54276 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.92■■□□□ 1.1
Msh6P54276 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh6P54276 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh6P54276 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms