Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Srp9P49962 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Srp9P49962 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Srp9P49962 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Srp9P49962 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Srp9P49962 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Srp9P49962 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Srp9P49962 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
Srp9P49962 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Srp9P49962 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.74□□□□□ -0.05
Srp9P49962 Mir5133-201ENSMUST00000174955 77 ntBASIC14.74□□□□□ -0.05
Srp9P49962 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Srp9P49962 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Srp9P49962 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.74□□□□□ -0.05
Srp9P49962 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Srp9P49962 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Srp9P49962 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.73□□□□□ -0.05
Srp9P49962 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Srp9P49962 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Srp9P49962 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Srp9P49962 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Srp9P49962 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.73□□□□□ -0.05
Srp9P49962 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Srp9P49962 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.73□□□□□ -0.05
Srp9P49962 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Srp9P49962 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.72□□□□□ -0.05
Srp9P49962 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Srp9P49962 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.72□□□□□ -0.05
Srp9P49962 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Srp9P49962 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.72□□□□□ -0.05
Srp9P49962 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Srp9P49962 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.72□□□□□ -0.05
Srp9P49962 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Srp9P49962 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Srp9P49962 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Srp9P49962 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.71□□□□□ -0.05
Srp9P49962 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Srp9P49962 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Srp9P49962 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Srp9P49962 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.71□□□□□ -0.05
Srp9P49962 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Srp9P49962 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms