Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps4bP46467 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.58■□□□□ 0.4
Vps4bP46467 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vps4bP46467 Gm13401-201ENSMUST00000117074 291 ntBASIC17.58■□□□□ 0.4
Vps4bP46467 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Vps4bP46467 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vps4bP46467 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps4bP46467 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.57■□□□□ 0.4
Vps4bP46467 Dio3-201ENSMUST00000097228 1449 ntBASIC17.57■□□□□ 0.4
Vps4bP46467 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps4bP46467 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Vps4bP46467 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps4bP46467 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps4bP46467 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps4bP46467 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps4bP46467 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps4bP46467 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.56■□□□□ 0.4
Vps4bP46467 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Gm15375-201ENSMUST00000119510 849 ntBASIC17.56■□□□□ 0.4
Vps4bP46467 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.56■□□□□ 0.4
Vps4bP46467 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Vps4bP46467 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vps4bP46467 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.56■□□□□ 0.4
Vps4bP46467 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4bP46467 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps4bP46467 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps4bP46467 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.56■□□□□ 0.4
Vps4bP46467 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps4bP46467 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps4bP46467 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4bP46467 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps4bP46467 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.54■□□□□ 0.4
Vps4bP46467 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vps4bP46467 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vps4bP46467 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vps4bP46467 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps4bP46467 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vps4bP46467 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4bP46467 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.53■□□□□ 0.4
Vps4bP46467 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4bP46467 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms